Fire is an ecological disturbance that alters soil microbiomes and the functions they mediate in terrestrial ecosystems. Soil microbial diversity in Mediterranean Basin ecosystems shows resilience to fire following the restoration of plant-soil feedbacks. We hypothesised that microbial functions related to organic matter decomposition and nutrient cycling might show similar patterns of recovery.
The biochemical effects of trees may significantly influence local pedogenesis as well as pedocomplexity, biodiversity and forest dynamics on both stand and landscape scales. One such effect is the decay of tree trunks, which is driven by organisms, and especially by the microbiome. Decomposition modifies soil formation, which due to the existence of many feedbacks affects the composition of the decomposer community.
Non-ribosomal peptides (NRPs) and polyketides (PKs) are among the most profuse families of secondary metabolites (SM) produced by bacteria. These compounds are believed to play an important ecological role in microbe-microbe and microbe-plant interactions in soil and roots microbiomes. Over the years, screening of NRPs and PKs in soil bacteria has resulted in high rates of rediscovery, mainly due to challenges associated with bacterial isolation.
Climate change and population growth generates a decrease in water availability around the world which can compromise the maintenance of sustainable agriculture. Thus, treated wastewater (TWW) became an alternative to minimize water shortage. However, this may indirectly affect the soil's microbial properties. In this study different soils irrigated for 0, 1, 8 and 20 years with TWW were sampled and from the east central region of Tunisia.
Improving rice yield potential is crucial for global food security. Taoyuan, China, is famous worldwide as a special ecosite for ultrahigh rice yield. Climatological factors affecting this phenomenon have been identified, but the potential molecular processes and environmental mechanisms promoting ultrahigh yield remain mysteries.
Soils host the vast majority of life on Earth including microorganisms and animals, and supporting all terrestrial vegetation. While soil organisms are pivotal for ecosystem functioning, the assemblages of different biota from a taxonomic and functional perspective, as well as how these different organisms interact, remains poorly known. We provide a brief overview of the taxonomic and functional diversity of all major groups of soil biota across different scales and organism sizes, ranging from viruses to prokaryotes and eukaryotes.
Although the effects of nitrogen (N) fertilization on soil microflora have been well studied, the effects should be verified across soil types and N-added levels. To understand the impacts of N fertilization on shifts in soil biological traits and bacterial communities and to further explore the coupling mediation of these parameters with respect to crop yields, we sampled soils from three experimental sites (each site received three levels of N fertilization (0, 168 and 312 kg N ha−1)) that share the same climatic conditions but have different soil types (clay, alluvial and sandy soils).
When biochar (BC) ages in soil, its properties change substantially: cation exchange capacity (CEC), surface area and porosity increase and water repellency decreases, consequently affecting the interactions with soil microorganisms. Activation of BC by organic acids may be regarded as artificial aging. Here, we study the effect of acid-activated BCs on soil microbial enzyme activities (EA) in comparison to several different control treatments without activated BC. A greenhouse pot experiment was conducted using a vineyard soil treated with multiple soil additives (four replications).
The assessment of microbial functional diversity is an important indicator of soil quality. Different methodological approaches are currently used; among them are enzyme activities (EA) and CLPP (community level physiological profile) techniques (e.g. MicroResp™ MR).
